a | aligner< T >::alin | |
alin(T _score, int _begin, int _end, int _beginW, int _endW, int _substitutions, int _inserts, int _deletions, char *_a, char *_b) | aligner< T >::alin | [inline] |
b | aligner< T >::alin | |
begin | aligner< T >::alin | |
beginW | aligner< T >::alin | |
context | aligner< T >::alin | |
end | aligner< T >::alin | |
endW | aligner< T >::alin | |
good | aligner< T >::alin | |
kword | aligner< T >::alin | |
Pdeletions | aligner< T >::alin | |
Pinserts | aligner< T >::alin | |
Psubstitutions | aligner< T >::alin | |
score | aligner< T >::alin | |
scoren | aligner< T >::alin | |
seg | aligner< T >::alin | |
Wdeletions | aligner< T >::alin | |
Winserts | aligner< T >::alin | |
Wsubstitutions | aligner< T >::alin | |
~alin() | aligner< T >::alin | [inline] |